IUCr 2005 (Florence, Italy) student award winners of the Larry Calvert CNC/IUCr Trust Fund Award
Sung Yeun Choi
(Department of Chemistry, University of Toronto)
Abstract: Evolution of Nanocrystallinity in Periodic Mesoporous Anatase Thin Films
By Sung Yeun Choi(1), Marc Mamak(2), Scott Speakman(3), Naveen Chopra(4), Geoffrey A. Ozin(1)
1. Materials Chemistry Research Group. Department of Chemistry, University of Toronto, 80 Saint George St, Toronto, Ontario, Canada M5S 3H6, (Canada), 2 Center for Nanostructure Imaging (CNI), Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, Ontario, M5S 3H6, (Canada), 3 Oak Ridge National Laboratory (ORNL), Oak Ridge, TN 37830-6064 (USA), 4 Xerox Research Centre of Canada, 2660 Speakman Drive, Mississauga, Ontario, L5K 2L1 (Canada).
Within the last few years, many periodic mesostructured forms of titania denoted meso-TiO2 have been produced based upon the self-assembly method. Besides the usual benefits of the self-assembly method including high surface area and uniform pore size and shape, the crystallinity and crystallite size of the anatase composing the channel walls of meso-TiO2 are an equally important factor since potential applications rely upon the intrinsic properties of titania governed by the extent and nature of its crystalline phase. Although crystallite growth, during the film calcination step, within the mesostructured titania framework should be considered the critical step in the formation of meso-TiO2 thin films, the issue of crystallite growth has yet to be identified as a major determining factor with respect to the properties of meso-TiO2 thin films and their applicability to electroactive and photoactive devices.
Herein we report the first kinetic study of the intrachannel wall phase-transition of amorphous titania to nanocrystalline anatase for periodic mesoporous titania thin films, monitored by time-resolved in-situ high temperature X-ray diffraction (HTXRD). Structural transformations associated with the phase transition are further probed by high-resolution scanning electron microscopy (HRSEM) and transmission electron microscopy (HRTEM). The model found to be most consistent with the kinetic data involves 1-D diffusion controlled growth of nanocrystalline anatase within the spatial confines of the channel walls of the mesostructure. The observation of anisotropic, rod-shaped anatase nanocrystals preferentially aligned along the channel axis implies that the framework of the liquid crystal templated mesostructure guides the crystal growth.
Jason Dwyer
(Departments of Chemistry and Physics, University of Toronto, Toronto)
Abstract: Ultrafast Melting in Metals Probed with Femtosecond Electron Diff'raction
By Jason R. Dwyer, Robert E. Jordan, Christopher T. Hebeisen, Maher Harb, Ralph Ernstorfer and R.J. Dwayne Miller
1. Departments of Chemistry and Physics, University of Toronto, Toronto, Canada
Femtosecond (fs) lasers are an ideal tool to excite materials on
timescales even shorter than vibrational periods, typically -100 fs. The
ability to resolve all of the resulting structural dynamics depends on
having a technique with femtosecond temporal resolution and capable of
providing high structural resolution. Femtosecond electron diffraction
satisfies both criteria and offer an unprecedented view of the fastest
possible structural dynamics [1].
By using a femtosecond laser, one is able to very quickly deposit energy
into a material - in these experiments, ultrathin films of gold and
nickel. This leads to superheating of the metal and thereby permits the
study of the familiar phenomenon of melting, only in this case the
process is strongly driven. Even under these conditions, however, the
material properties mediate the material response. In our first work
[1], aluminum melted in 3.5 picoseconds (ps); under equivalent
conditions, gold melts in 12 ps and nickel more quickly than gold. The
difference in timescales is a consequence of a material parameter - the
electron-phonon coupling constant - that differs by an order of
magnitude between the gold and nickel and determines bow quickly the
laser energy is transferred to nuclear motion. The observed structural
changes, however, are the same for the two metals and thus allow for a
generalized description of the molting mechanism.
(1) Siwick B,J. et at., Science, 2003, 302, 1382.
Jason Thomas Mayne
(Department of Biochemistry, University of Alberta, Edmonton)
Abstract: The Structural Basis for Ser/Thr Protein Phosphatase Inhibition
By Jason T. Maynesa, Huu Anh Luua, Maia Cherneya, Charles F.B. Holmes and Michael N.G. James,
Department of Biochemistry, University of Alberta, Edmonton, Canada
Serine/Threonine Protein Phosphatases are important in many cellular
processes including glycogen metabolism and immunosuppression.
Many marine prokaryotic organisms produce structurally diverse
phosphatase inhibitors that can be toxic. The surface of Ser/Thr
Phosphatases contain an inhibitor-binding loop which is important in
inhibitor activity. How this loop determines inhibitor-specificity is
unknown. We have solved the structures of Protein Phosphatase-1
(PP1) bound to four marine natural product inhibitors: okadaic acid,
motuporin, clavosine and microcystin-LA(2H)[1]. These inhibitors
bind in a similar manner to the phosphatase, exhibiting analogous
interactions and showing no structural rearrangement of the inhibitorbinding
loop. A structure solved using a mutant PP1, where the
inhibitor-binding loop from calcineurin has been substituted for the
native loop, reveals repositioning of only specific amino acid sidechains.
These results indicate that inhibitor specificity in Ser/Thr
Phosphatases is most likely due to specific interactions within the
inhibitor-binding loop and not structural rearrangements. There are
observable differences in the binding of inhibitors to PP1 and the
PP1-calcineurin hybrid, information that may be utilized in the design of
new immunosuppressant calcineurin inhibitors.
[1] Maynes J.T., Perreault K.R., Cherney M.M., Luu H.A., James M.N.G.,
Holmes C.F.B., J. Biol. Chem., 2004, 279, 43198.
Elitza Tocheva
(Department of Microbiology and Immunology, University of British Columbia, Vancouver)
Abstract: Visualization of the forward and reverse reactions catalyzed by nitrite reductase
By Elitza Tocheva, Michael E. P. Murphy,
1. Department of Microbiology and Immunology, University of
British Columbia, Vancouver, Canada.
The process of denitrification involves the sequential reduction of
nitrate (NO3-) to nitrite (NO2-), nitric oxide (NO), nitrous oxide (N2O)
and finally dinitrogen (N2). The nitrite reductase from Alcaligenes
faecalis S-6 (NiR) is a green 110 kDa periplasmic homotrimer with
each monomer containing one type I and one type II copper sites. The
type I is the site of electron transfer from the biological electron
donor, pseudoazurin. Electrons are then donated internally to the type
II Cu site, where NO2- is reduced to NO. Crystals of NiR are
orthorhombic with a trimer in the asymmetric unit.
To visualize the product bound at the active site, ascorbate
reduced crystals of NiR were exposed to a NO saturated solution and
frozen in liquid N2 in the absence of oxygen. Data were collected at
SSRL to 1.3 Å resolution. A difference electron-density map revealed
elongated density at the apical position of the type II Cu. After
refinement at full occupancy, the average B factor for NO is 29 Å2,
similar to that observed for water bound to the resting state of the
enzyme. The N (1.97 to 2.01 Å) and O (1.95 to 2.12 Å) atoms of NO
are equidistant from the Cu, thus the Cu-nitrosyl of NiR is
characterized with side-on coordination of a diatomic molecule (1).
To examine the ability of the enzyme to catalyze the reverse
reaction (NO + H2O -> e- + NO2- + 2H+), oxidized crystals of NiR
were exposed to a saturated NO solution. Refinement of the structure
to 1.4 Å revealed nitrite bound to the copper via its oxygens,
indicating completion of the reverse reaction in crystal. Spectroscopic
studies which show that at alkaline pH, nitric oxide oxidation is faster
than nitrite reduction (2) further support the conclusion that coppercontaining
NiR can catalyze the reverse reaction.
[1]Tocheva, E. I., Rosell, F. I., Mauk, G. A., and Murphy, M. E. P. (2004).
Science 304, 867-870. [2]Wijma, H. J., Canters, G. W., De Vries, S., and
Verbeet, M. P. (2004). Biochemistry 43, 10467.
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